CDS
| Accession Number | TCMCG073C17443 |
| gbkey | CDS |
| Protein Id | XP_010542027.2 |
| Location | join(2332161..2334195,2334319..2335135,2335235..2335325,2335328..2335554,2335628..2335838) |
| Gene | LOC104815362 |
| GeneID | 104815362 |
| Organism | Tarenaya hassleriana |
Protein
| Length | 1126aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA268022 |
| db_source | XM_010543725.2 |
| Definition | PREDICTED: LOW QUALITY PROTEIN: phytochrome C [Tarenaya hassleriana] |
EGGNOG-MAPPER Annotation
| COG_category | T |
| Description | Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] |
| KEGG_ko |
ko:K12120
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko04712
[VIEW IN KEGG] map04712 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGTCTTCTAAGTCGACAGACCAAACTAACTGTTCCCGGAGCAGTTCTATTCGATCTAGACCCAGTTCTCGAGTGAGTTCACAGATATGTGCTGATGCAAAGCTACATGTAAACTTCGAAGAATCCCATCGATTGTTTGATTATTCTGCTTCAGTTGACTTGAACATGCCTAGTTCGACTAGCAATGTTTCTCCTTCAACTATCTCAGCTTACCTGCAGAATATTCAGAGAGGGATGTTGATCCAGCCTTTTGGCTGCTTGATTGCTGTCGACGAGAAAAACCTCACAGTGATTGCATATAGTGAAAATGCCCAAGATATGTTGGGTTTGACACCACACACAGTGCCAAGCATGGAACAACAGGAAGCTCTGACTTTTGGAACAGATGTCCGGACGCTGTTTCAGTCCCCGGGTTCTGCTTCCTTGCAGAAAGTTGTTGACTTTGATGATATTAGTCTTCTAAACCCGATGCAGCTTCATTGCAGGACCTCAGGGAAGCCTTTTTACGCTATTCTGCATAGAATTGATGTGGGTCTGGTTATAGACTTAGAACCCGTGAGTCCGGTTGATGTGCCCGTGACTTCTGCCGGGGCATTGAAGTCTTATAAGCTTGCAGCCAAAGCCATTTCAAGATTGCAATCTTTACCTACTGGTAATATGTCGTTGCTATGTGATGTTCTGGTAAAGGAAGTTAGAGAATTAACCGGTTATGATCGGGTGATGGTGTATAGATTCCATGAAGATGAGCACGGGGAAGTGATTGCCGAATGCTGCAGGCCTGACTTGGAGCCTTATCTTGGGTTGCATTACTCGGCCACTGATATACCCCAAGCCTCGAGGTTTCTCTTCATGAGTAACAAGGTTAGAATGATATGTGATTGTTCAGCAGTACCAGTTAAGGTAGTTCAGGCGAAGGAACTGTCACAGCCGATAAGTCTTTGCGGATCTACTTTGAGAGCTCCTCATGGGTGTCATGCACAGTACATGAGTAATATGGGTTCAGTGGCATCTCTTGTTATGTCCGTGACGATCAACGGGAATGATAATGACGAGATGAACGTCGATCAATATCAACAGACAGGGAGAAGATTATGGGGCTTAGTGGTTTGCCATCACACAACTCCTCGGTTCGTGCCATTTCCTTTAAGGTATGCTTGTGAATTCTTGATTCAGATATTCAGTGTTCAGATCAACAAAGAGGTGGAATCAGCTTCTCTCTTGAAGGAGAAGCGGATTCTGCAAACTCAGAACATGCTCTGTGACATGCTTCTTCGTGATGCTCCCACGGGTATCGTTACTCAGTCTCCTAATATAATGGACCTCGTCAAGTGTGACGGAGCCGCCCTTTATCACCGAGAGAAGTTCTGGTTGCTAGGGTTAACTCCTACGGAGCCACAGATTAGAGATTTAATTGGATGGGTTCTCGAGTATCATGGTGGAACCGCTGGTTTGACCACCGATAGCCTAATGGAGTCGGGCTATCCCGGTGCTTCTGTTCTCGGGGAATCTGTTTGCGGAATGGTTGCTGCAAATATAACTTCGAACGATTTCCTTTTCTGGTTCCGGTCTGGCACTGCGAGAAAGATCAACTGGGGTGGCGCAAAACATGATCCCAATGACAAAGACGGTAAAAAGATGCATCCTAGATCGTCGTTCAAGGCATTTATGGAAGTAGTTAGATGGAAAAGCGTGCCGTGGGATGATATGGAACTCGATGCAATTCATTCTCTTAAGCTGATACTTAAAGGGTCATTGCAAGAGGAGACTCTGGATAATTCGAAGCCGGTCGTGGATAACAGGGTTCAGAAGGTGGATGAATTGTGTGTTGTCGTGAACGAGATGGTCCGTCTGATCGATACGGCTGCTGTCCCGATCTTTGCCGTTGATGCCTGTGGTGTGATAAATGGATGGAATTCGAAAGCGGCCGAGTTAACGGGTCTCGTAGTCGAGCAAGCAATAGGCAAACCTTTATGCGATCTCGTTGAAGCAGATTCAGCTGACACCATCAAGAACATGTTGGCCTTGGCTCTTGAAGGTAAAGAAGAACGGGATGTGGAGATTAAAATCAGATCATTTGGTCCTAAAAGGAAAAGCAGTCCTACTGTTTTGGTAATTAACGCGTGCTGTAGCAGAGACGTGACAGAAAATGTTCATGGCGTATGCTTTGTCGGCCAAGATGTTACTGGGCAGAGGACGCTCGTAGAAAAATACAGCCGTGTCCAAGGGGATTACACCAGAATCATGTGGAGCCCTTCGGCTCTCATCCCTCCTATATTCATGACAAATGAGAACGGGTTATGCTTAGAGTGGAGCGGCGCAATGCAGAAATTGTCAGGTCTGAACAGAGAGGAAGCCGTGGGCAAAATGCTTCTCGGGGAAGTATTCACCTTGAATAGTTATGGGTGCCGTCTTAAGGACGATGACACATCGATCGAACTAAGAATAATGTTAAATGCTGTGATTTCTGGGCAGGACTCCGAGAAGCTTTTCTTCGGCTTCTATGACCGTAAAGATAACTTTGTCGAGGCATTACTCTCTGCAAGCAAAAGGACTGATACTGAGGGAAAGGTTAACGGGGTATTGTGTTTTTTGCAAGTACCTAGTCCGGAACTCCAGAACGCTCTCCGGCTTCAGCGGAAATCAGAGCAGGCGACTGCCAGTGCCCTCAATAAGTTAGCGTATCTTCGTCAAGAAGTGAAACCCCCCCTAAATGCAATATCTTTCATTCAAGAGTTACTACATTCATCGGGTTTAGACGGAGAGAGAAGGCAGTTACAGAGAACCGGGGTTTTGTGTCGGGAGCAGTTAACCAAAATCATAGGCGATTCAGACATCAAGGGCATCGAGGAGGGCTATGCAGAACTGGGTTGCAGTGAATTCAACCTCGAGGAAGCCCTAGACGCTGTGGTGAAACAAGTGACGGTTCTTAGCGAAGAAAGAAAAAAAACAAGCTAAGAGCGTCAAGTGCAGATCGTTTCCGATTTCCCTCGGGAAGTTTCCTCGATGCAGTTGTACGGAGACAGCTCGAGGCTTCAACAAGTCCTCTCGGAGACGCTCTCGAGTGCCTTACGTTTCACCCCTGCCTTGGAGGGATCATCCATCTCGTTCAAGGTATCTCCATGGAAGGAACGTATAGGGAAAAGAATGCAAATGGCTCATCTCGAGTTCAGGATCACCCACCCGGCACCAGGACTACCGGAAGATCTGGTCAGGGAGATGTTTCAGCCGAGGCACGCGTTTTCGAGGGAAGGTCTGGGATTATACATCGCCCAGAAACTCGTGACACTAATGAACGGAAATTTGAGGTACCTCCGAGAGTCCGAAGCTTCGGCCTTTATAATCCTCACGGAATTTCCCTTGCTTCAACAGAGCCGCCATTAA |
| Protein: MSSKSTDQTNCSRSSSIRSRPSSRVSSQICADAKLHVNFEESHRLFDYSASVDLNMPSSTSNVSPSTISAYLQNIQRGMLIQPFGCLIAVDEKNLTVIAYSENAQDMLGLTPHTVPSMEQQEALTFGTDVRTLFQSPGSASLQKVVDFDDISLLNPMQLHCRTSGKPFYAILHRIDVGLVIDLEPVSPVDVPVTSAGALKSYKLAAKAISRLQSLPTGNMSLLCDVLVKEVRELTGYDRVMVYRFHEDEHGEVIAECCRPDLEPYLGLHYSATDIPQASRFLFMSNKVRMICDCSAVPVKVVQAKELSQPISLCGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGNDNDEMNVDQYQQTGRRLWGLVVCHHTTPRFVPFPLRYACEFLIQIFSVQINKEVESASLLKEKRILQTQNMLCDMLLRDAPTGIVTQSPNIMDLVKCDGAALYHREKFWLLGLTPTEPQIRDLIGWVLEYHGGTAGLTTDSLMESGYPGASVLGESVCGMVAANITSNDFLFWFRSGTARKINWGGAKHDPNDKDGKKMHPRSSFKAFMEVVRWKSVPWDDMELDAIHSLKLILKGSLQEETLDNSKPVVDNRVQKVDELCVVVNEMVRLIDTAAVPIFAVDACGVINGWNSKAAELTGLVVEQAIGKPLCDLVEADSADTIKNMLALALEGKEERDVEIKIRSFGPKRKSSPTVLVINACCSRDVTENVHGVCFVGQDVTGQRTLVEKYSRVQGDYTRIMWSPSALIPPIFMTNENGLCLEWSGAMQKLSGLNREEAVGKMLLGEVFTLNSYGCRLKDDDTSIELRIMLNAVISGQDSEKLFFGFYDRKDNFVEALLSASKRTDTEGKVNGVLCFLQVPSPELQNALRLQRKSEQATASALNKLAYLRQEVKPPLNAISFIQELLHSSGLDGERRQLQRTGVLCREQLTKIIGDSDIKGIEEGYAELGCSEFNLEEALDAVVKQVTVLSEERKKTSXERQVQIVSDFPREVSSMQLYGDSSRLQQVLSETLSSALRFTPALEGSSISFKVSPWKERIGKRMQMAHLEFRITHPAPGLPEDLVREMFQPRHAFSREGLGLYIAQKLVTLMNGNLRYLRESEASAFIILTEFPLLQQSRH |